miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|261638980|gb|FS109866.1|FS109866 GTGAAGTTTGAAAAGGGTAAAAATGGAAAAACATGATTAAATTTTGTCTTTGTTTCTTTTTCTTAATATGTGTGAAATGA
CAACAATTAACTTAATATGGAACGGAGGGAGTACAAGAAAAACCAGCAAATCATTTTGAGTGTTTGAGTACTCTGGATTC
TTTCGATTTCCTGGTATCAGCTAAACATAGTTATTGACTCTTGTCCTCATCATAGTTAAAAGGCAGCGGCACAGACTTGA
AGGCACGGTATTTTCCAACGTTATTCAAGTGCTCATTTTCCAACCTGAAAAAGTTCCAGATGCCTCGACGAAAGATTTCC
AAACAGGCAACAACTGCAACGAATGCTTTCTTATGCAGAAATGGCAGTTCTTGAATATCTAGAACCAACTGCATCCATAC
TAGTCTCAGAATAATGTCAAGAACAATGGCAACAAAGTAGACAATCTTGTGTGGCACGAGTAGCTTGTCTCTCAACCAAC
GATTTTTGGAATTCCTTTGCAATAGACCCCAATCTATGACAAGGTCCCAATAAGTGTTTGCAACTGTAGTAACTCCTGAA
GTTGATGCTGCCATTACTCTCCAAAAGGTTCCTCCCTTCT




Most similar to sp|Q9LJW0|PHO19_ARATH

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q9LJW0|PHO19_ARATH Phosphate transporter PHO1 homolog 9
            OS=Arabidopsis thaliana GN=PHO1-H9 PE=2 SV=1
          Length = 800

 Score =  199 bits (507), Expect = 8e-51
 Identities = 90/127 (70%), Positives = 106/127 (83%)
 Frame = -3

Query: 598  KGGTFWRVMAASTSGVTTVANTYWDLVIDWGLLQRNSKNRWLRDKLLVPHKIVYFVAIVL 419
            K GT+W  +A +TS + T+ NTYWD+  DWGL+ RNSKN WLRDKLLVP+K +YF+ +V 
Sbjct: 665  KRGTYWLTVAVTTSSIATLFNTYWDIFRDWGLMNRNSKNPWLRDKLLVPYKSIYFIVMVA 724

Query: 418  DIILRLVWMQLVLDIQELPFLHKKAFVAVVACLEIFRRGIWNFFRLENEHLNNVGKYRAF 239
            +++LRL WMQ VL I+E PFLHK+A VAVVA LEI RRGIWNFFRLENEHLNNVGKYRAF
Sbjct: 725  NVVLRLAWMQTVLGIKEAPFLHKRALVAVVASLEIVRRGIWNFFRLENEHLNNVGKYRAF 784

Query: 238  KSVPLPF 218
            KSVPLPF
Sbjct: 785  KSVPLPF 791